Jitendra Gaikwad
From Bioinformatics
Academic History
- Currently, doing my PhD at Macquarie University in Bioinformatics (Biodiversity informatics).
- Attended Advance diploma in bioinformatics course from University of Pune in 2003.
- Master of Science in Environmental Botany (Plant Ecology) from Mumbai University in 2002.
- Bachelor of Science in Botany from Mumbai University in 2000.
Skills
COMPUTER SKILLS
- Platforms: Windows and Linux.
- Software: ArcGIS 9.2, DIVA-GIS, GARP, Maxent, MSOffice 2000/2003, and Paint Shop Pro 7.
- Database: Oracle, MySQL
- Webserver: Apache Tomcat & Apache
RESEARCH SKILLS
- Competency in biological data management using relational database management systems.
- Taxonomic, ecosystems and indigenous traditional knowledge specific database designing and development.
- Networking with institutions and individuals for biodiversity and ethnobotanical information collation.
- Ecological modeling using DIVA, GARP and Maxent along with GIS based mapping using Mapserver, ArcGIS 9.
- Collation, curation and validation of biodiversity, biogeographical, ethnobotanical and phytochemical data.
- Strong ability to understand, integrate and analyse complex and varied biodiversity data.
Publications
- Gaikwad J, Wilson K, Kohen J, Vemulpad S, Jamie J, Ranganathan S: Combining Ethnobotany and Informatics to Discover Knowledge from Data. In: Ethnomedicinal Plants: Revitalization of Traditional Knowledge of Herbs. Edited by Rai M, Acharya D, Rios JL. New Hampshire, USA: Science Publishers; In Press.
- Gaikwad J, Khanna V, Vemulpad S, Jamie J, Kohen J, Ranganathan S: CMKb: a web-based prototype for integrating Australian Aboriginal customary medicinal plant knowledge. BMC Bioinformatics 2008, 9(Suppl 12):S25. [1]
- J Gaikwad and V Chavan (2005), Open access and biodiversity conservation: Challenges and potentials for developing world. Data Science journal, Volume 5, 05 June 2006. [2]
- Watve, A. V., J. Gaikwad, and Vishwas Chavan (2004), Accessing biological collections data of Indian origin, Current Science, 86(1): 8. [3]
Professional Experience
- 2006
- Project Coordinator in Macquarie University, Department of Chemistry & Biomolecular Sciences, NSW, Australia.
- 2003 to 2006
- Project Assistant, Information Division, National Chemical Laboratory, Pune, India.
Seminars and Posters
- e-Biosphere 09 International Conference on Biodiversity Informatics held in London, United Kingdom from 1-3 June 2009. Presented a poster in this conference titled “Combating medicinal plant extinction and indigenous culture loss- an Australian model”
- Biodiversity Information Standards (TDWG) Annual Conference 2008 held in Fremantle (Perth), Australia from 19th-25th October 2008. Presented a talk in this conference titled “CMKB- integrating Australian customary medicinal plant knowledge with the framework of Atlas of Living Australia”
- International Conference on Chemoinformatics held in National Chemical Laboratory, Pune, India from 22nd to 24th January 2007.
- National Workshop on Marine biodiversity data management and digitization of museum specimens, held at National Institute of Oceanography, Goa. India from 15th to 16th January 2007.
- GBIF’s International Ecological Niche Modeling workshop held in Bangalore, India from 13th to 17th November 2006.
- ComBio 2006 conference held at Brisbane Convention Centre, Australia from 24 to 28 September 2006. Presented a poster at this conference titled “CMKB- an integrated resource for customary medicinal knowledge”.
Links
- Atlas of living Australia (ALA) http://www.anbg.gov.au/cpbr/program/hb/index.html
- Australian Virtual Herbarium http://www.anbg.gov.au/avh/
- Australian Biological Resources Study Fauna Online http://www.environment.gov.au/biodiversity/abrs/online-resources/fauna/index.html
- Barcode of life database (BOLD) http://www.barcodinglife.org/views/login.php
- Biodiversity Heritage Library (BHL) http://www.biodiversitylibrary.org
- Customary Medicinal Knowledgebase http://biolinfo.org/cmkb
- DiaMedBase http://www.progenebio.in/DMP/DMP.htm
- Encyclopedia of Indian Medicinal Plants http://www.frlht.org.in/meta/
- Encyclopedia of Life (EOL) http://www.eol.org/home.html
- Global invasive species database (GISD) http://www.issg.org/database/welcome/
- Global Biodiversity Information Facility (GBIF) http://www.gbif.org
- Integrated Taxonomic Information System (ITIS) http://www.itis.gov/
- iSpecies http://darwin.zoology.gla.ac.uk/~rpage/ispecies/index.php
- IndFauna http://www.ncbi.org.in
- LifeWatch http://www.lifewatch.eu/index.php?id=411
- Natural History Museum (UK) http://www.nhm.ac.uk/nature-online/life/index.html
- Ocean Biogeographic Information System (OBIS) http://www.iobis.org
- Royal Botanic Garden Edinburgh http://www.rbge.org.uk/rbge/web/index.jsp
- Species2000 http://www.sp2000.org/
- SpeciesBase http://www.speciesbase.org/
- Tree of Life http://tolweb.org/tree/phylogeny.html
- TreeBASE http://www.treebase.org/treebase/index.html
- uBio http://www.ubio.org
Contact Details
F7B, R.No 120,
Department of Chemistry and Biomolecular Sciences,
Macquarie, University, North Ryde,
Sydney, NSW 2109
Australia
Ph +61 2 9850 8276
Fax +61 2 9850 8313

