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Home	EST Pre-processing	EST Clustering and Assembly	ORF prediction and EST Translation
EST Data resources	EST analysis Pipelines	EST Applications	Miscellaneous

Programs for EST sequence assembly and consensus generation
Description	Free for academic users	Availability of web interface	Comments
CAP3	√	√	None
Phrap	√	X	None
stackPACK	√	X	None
miraEST	√	X	None
Xsact and Xtract	√	X	None
CLU	√	X	None
CLOBB	√	√	None
ESTs aSSEmbly using Malig	√	√	None
Paracel Transcript Assembler	X	X	None
megaBLAST	√	√	None