Home EST Pre-processing EST Clustering and Assembly ORF prediction and EST Translation
EST Data resources  EST analysis Pipelines  EST Applications Miscellaneous


EST applications and visualization resources
Description
Comments
Free for academic users
EST-based digital gene expression profiling
Gene and allele identification
Protein multiple sequence alignments from EST
Automated phylogenetic analysis of  ESTs
√   W

 

For Gene Structure prediction and Alternative Splicing
Description
Comments
Free for academic users
An EST-based gene finder that infers the predominant and alternative gene structures in anonymous genomic sequences.
√   W
To identify Alternative Splicing events
√   W

 

For SNP Discovery
Description
Comments
Free for academic users
To find SNP candidates in an EST CAP3 assembly

SNP discovery from ESTsin Humans

 

Visualization Tools
Description
Comments
Free for academic users
Visualizing Splicing of Genes from EST Data
√   W
CORBA software components to create and publish EST alignments and clusters

W:Web Interface available